TY - JOUR
T1 - Genetic Causes, Clinical Features, and Survival of Underlying Inborn Errors of Immunity in Omani Patients
T2 - a Single-Center Study
AU - Al-Tamemi, Salem
AU - Al-Zadjali, Shoaib
AU - Bruwer, Zandre
AU - Naseem, Shafiq Ur Rehman
AU - Al-Siyabi, Nabila
AU - ALRawahi, Mohammed
AU - Alkharusi, Khalsa
AU - Al-Thihli, Khalid
AU - Al-Murshedi, Fathiya
AU - AlSayegh, Abeer
AU - Al-Maawali, Almundher
AU - Dennison, David
N1 - Funding Information:
Part of this study was funded by a Sultan Qaboos University research grant. No support was received during the preparation of this manuscript.
Publisher Copyright:
© 2022, The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.
PY - 2022
Y1 - 2022
N2 - Purpose: Early identification of inborn errors of immunity (IEIs) is crucial due to the significant risk of morbidity and mortality. This study aimed to describe the genetic causes, clinical features, and survival rate of IEIs in Omani patients. Methods: A prospective study of all Omani patients evaluated for immunodeficiency was conducted over a 17-year period. Clinical features and diagnostic immunological findings were recorded. Targeted gene testing was performed in cases of obvious immunodeficiency. For cases with less conclusive phenotypes, a gene panel was performed, followed by whole-exome sequencing if necessary. Results: A total of 185 patients were diagnosed with IEIs during the study period; of these, 60.5% were male. Mean ages at symptom onset and diagnosis were 30.0 and 50.5 months, respectively. Consanguinity and a family history of IEIs were present in 86.9% and 50.8%, respectively. Most patients presented with lower respiratory infections (65.9%), followed by growth and development manifestations (43.2%). Phagocytic defects were the most common cause of IEIs (31.9%), followed by combined immunodeficiency (21.1%). Overall, 109 of 132 patients (82.6%) who underwent genetic testing received a genetic diagnosis, while testing was inconclusive for the remaining 23 patients (17.4%). Among patients with established diagnoses, 37 genes and 44 variants were identified. Autosomal recessive inheritance was present in 81.7% of patients with gene defects. Several variants were novel. Intravenous immunoglobulin therapy was administered to 39.4% of patients and 21.6% received hematopoietic stem cell transplantation. The overall survival rate was 75.1%. Conclusion: This study highlights the genetic causes of IEIs in Omani patients. This information may help in the early identification and management of the disease, thereby improving survival and quality of life.
AB - Purpose: Early identification of inborn errors of immunity (IEIs) is crucial due to the significant risk of morbidity and mortality. This study aimed to describe the genetic causes, clinical features, and survival rate of IEIs in Omani patients. Methods: A prospective study of all Omani patients evaluated for immunodeficiency was conducted over a 17-year period. Clinical features and diagnostic immunological findings were recorded. Targeted gene testing was performed in cases of obvious immunodeficiency. For cases with less conclusive phenotypes, a gene panel was performed, followed by whole-exome sequencing if necessary. Results: A total of 185 patients were diagnosed with IEIs during the study period; of these, 60.5% were male. Mean ages at symptom onset and diagnosis were 30.0 and 50.5 months, respectively. Consanguinity and a family history of IEIs were present in 86.9% and 50.8%, respectively. Most patients presented with lower respiratory infections (65.9%), followed by growth and development manifestations (43.2%). Phagocytic defects were the most common cause of IEIs (31.9%), followed by combined immunodeficiency (21.1%). Overall, 109 of 132 patients (82.6%) who underwent genetic testing received a genetic diagnosis, while testing was inconclusive for the remaining 23 patients (17.4%). Among patients with established diagnoses, 37 genes and 44 variants were identified. Autosomal recessive inheritance was present in 81.7% of patients with gene defects. Several variants were novel. Intravenous immunoglobulin therapy was administered to 39.4% of patients and 21.6% received hematopoietic stem cell transplantation. The overall survival rate was 75.1%. Conclusion: This study highlights the genetic causes of IEIs in Omani patients. This information may help in the early identification and management of the disease, thereby improving survival and quality of life.
KW - Gene panel testing
KW - Immunological phenotype
KW - Inborn errors of immunity
KW - Oman
KW - Primary immunodeficiency diseases
KW - Targeted gene sequencing
KW - Whole-exome sequencing
UR - http://www.scopus.com/inward/record.url?scp=85141090150&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85141090150&partnerID=8YFLogxK
U2 - 10.1007/s10875-022-01394-3
DO - 10.1007/s10875-022-01394-3
M3 - Article
C2 - 36324046
AN - SCOPUS:85141090150
SN - 0271-9142
JO - Journal of Clinical Immunology
JF - Journal of Clinical Immunology
ER -